NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
151.0 |
| Mean read quality |
26.7 |
| Median read length |
151.0 |
| Median read quality |
34.8 |
| Number of reads |
3,271,523.0 |
| Read length N50 |
151.0 |
| STDEV read length |
0.0 |
| Total bases |
493,999,973.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q10 |
3271365 (100.0%) 494.0Mb |
| >Q15 |
3261943 (99.7%) 492.6Mb |
| >Q20 |
3128786 (95.6%) 472.4Mb |
| >Q25 |
2739267 (83.7%) 413.6Mb |
| >Q30 |
2181377 (66.7%) 329.4Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
40.5 (151) |
| 2 |
40.5 (151) |
| 3 |
40.5 (151) |
| 4 |
40.5 (151) |
| 5 |
40.5 (151) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
151 (17.9) |
| 2 |
151 (25.3) |
| 3 |
151 (32.4) |
| 4 |
151 (23.7) |
| 5 |
151 (23.2) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths